> ## Documentation Index
> Fetch the complete documentation index at: https://docs.plutus.systems/llms.txt
> Use this file to discover all available pages before exploring further.

# Introduction

> Your gateway to the Asclepius API

# Welcome to the Asclepius API

The Asclepius API gives you full programmatic access to the Asclepius molecular dynamics engine — letting you automate workflows, upload data, build systems, launch simulations, run analyses, and retrieve results entirely from your own applications.

Whether you're integrating Asclepius into a research pipeline, building internal tools, or automating large-scale simulation workloads, this documentation is your starting point.

***

## Get started quickly

Jump in and learn the core concepts of running simulations with Asclepius.

<Card title="Quickstart Guide" icon="rocket" href="/quickstart" horizontal>
  A simple, five-step walkthrough to submit your first simulation.
</Card>

***

## Explore what you can build

Use the API to tailor Asclepius to your exact needs.

<Columns cols={2}>
  <Card title="Develop with the API" icon="terminal" href="/api-reference/introduction">
    Learn how to authenticate, upload files, create systems, and launch simulations programmatically.
  </Card>

  <Card title="Upload & Manage Data" icon="cloud-upload" href="/api-reference/endpoint/file">
    Add molecular structures, force fields, and other resources for use in your workflows.
  </Card>

  <Card title="Build & Simulate" icon="beaker" href="/api-reference/endpoint/job">
    Construct molecular systems and submit MD simulations using customizable parameters.
  </Card>

  <Card title="Analyze Results" icon="chart-line" href="/api-reference/endpoint/analysis">
    Retrieve outputs, inspect trajectories, and run analysis pipelines.
  </Card>
</Columns>

***

## Want to see what’s possible?

<Card title="Explore example datasets" icon="stars" href="https://asclepius.vorticity.xyz/databank">
  Browse curated molecular dynamics datasets created using Asclepius.
</Card>

***

## Ready to begin?

Use this documentation as your guide as you integrate Asclepius into your scientific or engineering workflows.

<Note>
  If you get stuck, have questions, or want feature guidance, feel free to reach out or explore additional examples in the dataset bank.
</Note>